ML-DmBG2-c2, Multi mapper

Dm Cell Line Expression RNA-seq ML-DmBG2-c2 multiply mapping reads (Celniker project, Celniker subgroup)


Stranded libraries were created from polyA+ RNA isolated from the D. melanogaster ML-DmBG2-c2 cell line, sequenced using Illumina GAIIx with single and/or paired-end modules, and aligned with TopHat against the r5 genome. Tracks show read alignments and density.
Total read count: 35382517
Mapped read count: 29226185
Alignment rate: 82%

General Description

RNA-seq analysis was performed on poly(A)+ RNA from D. melanogaster cell lines. Reads were sequenced on Illumina GAIIx were aligned to the D. melanogaster r5 genome using TopHat.


  1. Data Analysis: TopHat stranded RNAseq alignment
  1. External Links: SRR070262, SRR070270, SRR111870

Related modENCODE submissions:

Release Date: 2012-02-06