Kc167 (polyA RNA), Multi mapper

D.melanogaster Cell Line Expression unstranded RNA-seq Kc167 multiply mapping reads (Celniker project, Graveley subgroup)


Unstranded libraries were created from polyA+ RNA isolated from the D. melanogaster Kc167 cell line, sequenced using Illumina GAIIx with single and/or paired-end modules, and aligned with TopHat against the r5 genome. Tracks show read alignments and density.
Total read count: 49099950
Mapped read count: 32311496
Alignment rate: 65%

General Description

RNA-seq analysis was performed on poly(A)+ RNA from D. melanogaster cell lines. Reads were sequenced on Illumina GAIIx were aligned to the D. melanogaster r5 genome using TopHat.


  1. Data Analysis: TopHat RNAseq alignment
  1. External Links: SRR015084, SRR015086, SRR015088, SRR015090, SRR015092

Related modENCODE submissions:

Release Date: 2012-05-18