Copy Number Variation

CNV in Cell Lines (MacAlpine project, MacAlpine subgroup)

General Description

Analysis of copy number variation across modENCODE Drosophila cell line by high throughput sequencing. We observe numerous copy number variations for the different cell lines, with each cell line having a distinct ploidy signature.

Protocols

  1. Growth and isolation: DNA_isolation:DM:1, Cell_growth:DM:1
  2. Sample preparation: Genomic_DNA_library:DM:1
  3. Data Generation: Illumina_sequencing:DM:1
  4. Data Analysis: CNV_seq_analysis:DM:1, Illumina_seq_maq_processing:DM:1

Sample Details



Release Date: 2009-12-22 Tracks 4534 4542 4535 Release Date: 2010-10-14 Tracks 7597