Embryo 14-16hr

Dm embryos, em14-16hr after egg laying SOLiD RNA-Seq (Celniker project, Celniker subgroup)

Details

Sequences from 14-16 hr embryo total RNA (SOLiD) were aligned to the D. melanogaster r5 genome using TopHat. Tracks show aligned reads and read density.

General Description

Strand-specific RNA-seq analysis was performed on 12 total RNA samples in a time course spanning the development of the D. melanogaster embryo, from 0-2hr through 22-24hr in two-hour windows. Reads from Applied Biosystems SOLiD sequencing were aligned to the genome sequence using TopHat.

Protocols

  1. Other Protocols: TopHat alignment v1.3.1
  1. External Links: SRR034227

Related modENCODE submissions:


Release Date: 2012-01-12