454 Oregon-R Adult Female (polyA+ RNA)

Dm Dev Timecourse Expression OreR AdF 454 sequence alignment (Celniker project, Celniker subgroup)

Details

Unstranded libraries were created from polyA+ RNA isolated from the D. melanogaster Oregon R adult females, sequenced on Roche 454 platform, and aligned with Sim4. Reads were submitted to SRA.

General Description

RNA-seq analysis onthe 454 platform was performed on poly(A)+ RNA from selected developmental stages spanning the life cycle of D. melanogaster. Total RNA was isolated by the Peter Cherbas group. Isolation of poly(A)+ RNA and library construction was performed by Blanchette, Cherbas, or Roche. Libraries were sequenced at Roche or in the Blanchette lab. SFF files were generated and submitted to SRA.

Protocols

  1. Other Protocols: Alignment of 454 sequences
  1. External Links: SRR069882

Referenced modENCODE submissions:


Release Date: 2012-08-24